改进python csv处理循环
我有一个csv文件,需要从中导出多个列的数据。第4列包含行名。每当此列中的值发生更改时,我导出的数据都需要写入一个新的单独文件。下面的代码可以工作,但速度相当慢。关于如何改进这一点有什么建议吗 补充:数据样本:改进python csv处理循环,python,file,csv,optimization,Python,File,Csv,Optimization,我有一个csv文件,需要从中导出多个列的数据。第4列包含行名。每当此列中的值发生更改时,我导出的数据都需要写入一个新的单独文件。下面的代码可以工作,但速度相当慢。关于如何改进这一点有什么建议吗 补充:数据样本: Altitude,Date,Db,Depth,Linename,Qmag,TF,TF_HP,X,X_ob,X_org,Y,Y_ob,Y_org 10.87,10/2/2015,148,21.8342,10,1316,48831.936,0.060026123,506479.5515,50
Altitude,Date,Db,Depth,Linename,Qmag,TF,TF_HP,X,X_ob,X_org,Y,Y_ob,Y_org
10.87,10/2/2015,148,21.8342,10,1316,48831.936,0.060026123,506479.5515,506479.46,506479.46,5726744.3,5726743.73,5726743.73
10.84,10/2/2015,148,21.8342,11,1316,48831.969,0.092713686,506479.7927,506479.77,506479.77,5726744.443,5726744.2,5726744.2
10.85,10/2/2015,148,21.8669,11,1313,48832.014,0.137400275,506479.9672,506479.77,506479.77,5726744.741,5726744.2,5726744.2
10.82,10/2/2015,148,21.8342,12,1311,48831.969,0.092093953,506480.1677,506479.92,506479.92,5726744.945,5726744.44,5726744.44
10.83,10/2/2015,148,21.8669,12,1309,48831.969,0.091807708,506480.326,506480.08,506480.08,5726745.195,5726744.68,5726744.68
Python代码:
import glob,csv,os, itertools
list_of_files = glob.glob('C:/test/*.csv')
directory = 'C:/test/conv/'
if not os.path.exists(directory):
os.makedirs(directory)
for filename in list_of_files:
with open(filename,"r") as source:
header_line = next(source)
rdr= csv.reader( source, delimiter = ',',lineterminator='\n' )
x=0
for row in itertools.islice(rdr,0,None):
itemRow4 = row[4]
outfileName=directory+itemRow4+'.csv'
with open(outfileName,"a") as result:
wtr=csv.writer(result, lineterminator='\n')
if x == 0:
previousitemRow4 = row[4]
x = x+1
if previousitemRow4 == itemRow4:
wtr.writerow((row[8],row[11],row[6],row[0]))
previousitemRow4 = itemRow4
if previousitemRow4 != itemRow4:
wtr.writerow((row[8],row[11],row[6],row[0]))
print 'next line'
previousitemRow4 = itemRow4
使用标准Unix shell工具、和:
$cut-d,-f5out-${lineno}.csv
完成
$ls out-*.csv
out-10.csv out-11.csv out-12.csv out-Linename.csv
也许
grep
表达式不够复杂,因为行号可能出现在第5列以外的其他列中。在这种情况下,可以使用一个简单的正则表达式使grep
仅在第5列中查找lineno。根据Eumiro的建议,我提出了这个解决方案。我试着使用一个列表的目录,但无法使它工作。下面的解决方案有效且速度非常快。谢谢大家的帮助
import glob,csv,os, itertools
list_of_files = glob.glob('C:/test/*.csv')
print 'By the Power of the Python, Split these here files!'
directory = 'C:/test/conv/'
if not os.path.exists(directory):
os.makedirs(directory)
for filename in list_of_files:
storage = []
specialStorage = []
with open(filename,"r") as source:
header_line = next(source)
rdr= csv.reader( source, delimiter = ',',lineterminator='\n' )
x=0
resetValue = 0
for row in itertools.islice(rdr,0,None):
itemRow4 = row[4]
if x == 0:
previousitemRow4 = row[4]
x = x+1
outfileName=directory+previousitemRow4+'.csv'
if previousitemRow4 == itemRow4:
storage.append((row[8],row[11],row[6],row[0]))
previousitemRow4 = itemRow4
if previousitemRow4 != itemRow4:
with open(outfileName,"a") as result:
wtr=csv.writer(result, lineterminator='\n')
previousitemRow4 = itemRow4
if len(specialStorage) !=0:
wtr.writerow(specialStorage)
wtr.writerows(storage)
storage = []
specialStorage=(row[8],row[11],row[6],row[0])
else:
with open(outfileName,"a") as result:
wtr=csv.writer(result, lineterminator='\n')
previousitemRow4 = itemRow4
wtr.writerow(specialStorage)
wtr.writerows(storage)
storage = []
print 'end of file reached'
您经常打开
outfileName
。将输出行附加到列表中,并在末尾写出所有内容。这不是对您的问题的直接解决方案/答案,而是更一般的建议:如果您想查看代码中(每个方法)花费了多少处理时间,请使用探查器。然后,尝试优化大部分处理时间的使用位置:提高调用的执行时间,或者将调用数量限制在较慢的部分。请参阅Python中的本文档页。@eumiro,显然@Michiel希望每行有一个单独的outfileName
。因此,他不会多次打开同一个文件(除非itemrrow4
包含相同的值——他没有包含一个包含数据的示例CSV文件)。@Michiel,你能在问题中包含一个(简短但有代表性的)CSV文件示例吗?@jschulenklopper:我已经包含了该文件的一个小示例。在实际文件中,可能有10000行或更多行属于同一数据行(即第4行中的值相同),谢谢。不过,我使用的是windows机器,只有python可供我使用。
import glob,csv,os, itertools
list_of_files = glob.glob('C:/test/*.csv')
print 'By the Power of the Python, Split these here files!'
directory = 'C:/test/conv/'
if not os.path.exists(directory):
os.makedirs(directory)
for filename in list_of_files:
storage = []
specialStorage = []
with open(filename,"r") as source:
header_line = next(source)
rdr= csv.reader( source, delimiter = ',',lineterminator='\n' )
x=0
resetValue = 0
for row in itertools.islice(rdr,0,None):
itemRow4 = row[4]
if x == 0:
previousitemRow4 = row[4]
x = x+1
outfileName=directory+previousitemRow4+'.csv'
if previousitemRow4 == itemRow4:
storage.append((row[8],row[11],row[6],row[0]))
previousitemRow4 = itemRow4
if previousitemRow4 != itemRow4:
with open(outfileName,"a") as result:
wtr=csv.writer(result, lineterminator='\n')
previousitemRow4 = itemRow4
if len(specialStorage) !=0:
wtr.writerow(specialStorage)
wtr.writerows(storage)
storage = []
specialStorage=(row[8],row[11],row[6],row[0])
else:
with open(outfileName,"a") as result:
wtr=csv.writer(result, lineterminator='\n')
previousitemRow4 = itemRow4
wtr.writerow(specialStorage)
wtr.writerows(storage)
storage = []
print 'end of file reached'