Python matplotlib-在CentOS上安装-setup.py生成失败

正在尝试安装matplotlib（1.1.0和CentOS上的python 2.7.3）

python setup.py构建

看起来不错，直到：

running build_ext
building 'matplotlib.ft2font' extension
gcc -pthread -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -DPY_ARRAY_UNIQUE_SYMBOL=MPL_ARRAY_API -DPYCXX_ISO_CPP_LIB=1 -I/mnt/storage/laviniag/Tools/Qiime/qiime_software/numpy-1.5.1-release/lib/python2.7/site-packages/numpy/core/include -I/usr/include/freetype2 -I/usr/local/include -I/usr/include -I. -I/mnt/storage/laviniag/Tools/Qiime/qiime_software/python-2.7.3-release/include/python2.7 -c src/ft2font.cpp -o build/temp.linux-x86_64-2.7/src/ft2font.o
gcc -pthread -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -DPY_ARRAY_UNIQUE_SYMBOL=MPL_ARRAY_API -DPYCXX_ISO_CPP_LIB=1 -I/mnt/storage/laviniag/Tools/Qiime/qiime_software/numpy-1.5.1-release/lib/python2.7/site-packages/numpy/core/include -I/usr/include/freetype2 -I/usr/local/include -I/usr/include -I. -I/mnt/storage/laviniag/Tools/Qiime/qiime_software/python-2.7.3-release/include/python2.7 -c src/mplutils.cpp -o build/temp.linux-x86_64-2.7/src/mplutils.o
gcc -pthread -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -DPY_ARRAY_UNIQUE_SYMBOL=MPL_ARRAY_API -DPYCXX_ISO_CPP_LIB=1 -I/mnt/storage/laviniag/Tools/Qiime/qiime_software/numpy-1.5.1-release/lib/python2.7/site-packages/numpy/core/include -I/usr/include/freetype2 -I/usr/local/include -I/usr/include -I. -I/mnt/storage/laviniag/Tools/Qiime/qiime_software/python-2.7.3-release/include/python2.7 -c CXX/cxx_extensions.cxx -o build/temp.linux-x86_64-2.7/CXX/cxx_extensions.o
gcc -pthread -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -DPY_ARRAY_UNIQUE_SYMBOL=MPL_ARRAY_API -DPYCXX_ISO_CPP_LIB=1 -I/mnt/storage/laviniag/Tools/Qiime/qiime_software/numpy-1.5.1-release/lib/python2.7/site-packages/numpy/core/include -I/usr/include/freetype2 -I/usr/local/include -I/usr/include -I. -I/mnt/storage/laviniag/Tools/Qiime/qiime_software/python-2.7.3-release/include/python2.7 -c CXX/IndirectPythonInterface.cxx -o build/temp.linux-x86_64-2.7/CXX/IndirectPythonInterface.o
gcc -pthread -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -DPY_ARRAY_UNIQUE_SYMBOL=MPL_ARRAY_API -DPYCXX_ISO_CPP_LIB=1 -I/mnt/storage/laviniag/Tools/Qiime/qiime_software/numpy-1.5.1-release/lib/python2.7/site-packages/numpy/core/include -I/usr/include/freetype2 -I/usr/local/include -I/usr/include -I. -I/mnt/storage/laviniag/Tools/Qiime/qiime_software/python-2.7.3-release/include/python2.7 -c CXX/cxxsupport.cxx -o build/temp.linux-x86_64-2.7/CXX/cxxsupport.o
gcc -pthread -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -DPY_ARRAY_UNIQUE_SYMBOL=MPL_ARRAY_API -DPYCXX_ISO_CPP_LIB=1 -I/mnt/storage/laviniag/Tools/Qiime/qiime_software/numpy-1.5.1-release/lib/python2.7/site-packages/numpy/core/include -I/usr/include/freetype2 -I/usr/local/include -I/usr/include -I. -I/mnt/storage/laviniag/Tools/Qiime/qiime_software/python-2.7.3-release/include/python2.7 -c CXX/cxxextensions.c -o build/temp.linux-x86_64-2.7/CXX/cxxextensions.o
g++ -pthread -shared build/temp.linux-x86_64-2.7/src/ft2font.o build/temp.linux-x86_64-2.7/src/mplutils.o build/temp.linux-x86_64-2.7/CXX/cxx_extensions.o build/temp.linux-x86_64-2.7/CXX/IndirectPythonInterface.o build/temp.linux-x86_64-2.7/CXX/cxxsupport.o build/temp.linux-x86_64-2.7/CXX/cxxextensions.o -L/usr/local/lib -L/usr/lib -L/usr/local/lib64 -L/usr/lib64 -L/mnt/storage/laviniag/Tools/Qiime/qiime_software/python-2.7.3-release/lib -lfreetype -lz -lstdc++ -lm -lpython2.7 -o build/lib.linux-x86_64-2.7/matplotlib/ft2font.so
**/usr/bin/ld: /usr/local/lib/libpython2.7.a(parsetok.o): relocation R_X86_64_32 against `.rodata.str1.1' can not be used when making a shared object; recompile with -fPIC
/usr/local/lib/libpython2.7.a: could not read symbols: Bad value
collect2: ld returned 1 exit status
error: command 'g++' failed with exit status 1**

---

所以我猜我需要编辑配置文件或者允许共享？非常感谢您的帮助。

matplotlib是安装起来非常困难的软件包之一，还有很多其他软件包（ahem…lxml、pyside/pyqt4等）

---

省去一些麻烦，检查一个预建的。continuum或canopy from Enthough在cetos上很好，可以为您节省大量的麻烦（免费安装）。

只要使用pip和virtualenv，它就可以正常工作（CentOS-6.5、x86_64、python-2.6）

您是否将python构建为64位？好问题，不知道，我刚刚使用了yum进行了更新。python 2.7不能通过yum安装，当然不是在

/usr/local

下。对不起，是的，你是对的。它是通过qiime deploy（）安装的。我不知道它的作用。也许你应该通过它来安装matplotlib。在linux上安装并没有那么糟糕，你只需要获得安装的依赖项的正确版本。Hanks Phil Cooper，我会调查Anaconda。问题的一部分是机器上的默认python是2.6.6，没有其他人想要更新，而qiime想要2.7.3，因此需要两次安装。