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ggplot2不会安装在rstudio中_R_Ggplot2_Package_Installation - Fatal编程技术网

ggplot2不会安装在rstudio中

ggplot2不会安装在rstudio中,r,ggplot2,package,installation,R,Ggplot2,Package,Installation,我有3个学生在一个20人的班上,他们无法让ggplot2通过Rstudio在他们的计算机上安装所有运行10.8到10.10的旧Mac电脑。他们的错误信息如下。看起来他们运行的代码是正确的,我不明白为什么在他们的电脑上不起作用。任何关于下一步尝试的建议都将不胜感激 学生1 学生2 学生3 首先要尝试的是让他们首先更新到R的最新版本。前两个版本运行3.3.3,第三个版本运行一些3.2版本。最新版本是3.5.1 对于学生2,问题是rlang需要首先更新;这是一个遗漏的依赖项,但我相信现在已经修复了,所

我有3个学生在一个20人的班上,他们无法让ggplot2通过Rstudio在他们的计算机上安装所有运行10.8到10.10的旧Mac电脑。他们的错误信息如下。看起来他们运行的代码是正确的,我不明白为什么在他们的电脑上不起作用。任何关于下一步尝试的建议都将不胜感激

学生1

学生2

学生3


首先要尝试的是让他们首先更新到R的最新版本。前两个版本运行3.3.3,第三个版本运行一些3.2版本。最新版本是3.5.1

对于学生2,问题是rlang需要首先更新;这是一个遗漏的依赖项,但我相信现在已经修复了,所以更新R以便您可以使用最新的ggplot版本应该会有所帮助。有关详细信息,请参阅


对于学员3,如第一条错误消息中所述,rgeos和sf至少需要R3.3.0。

学员1:输出看起来正常,您认为为什么没有安装?学生2:建议您首先手动重新安装/更新rlang,必须在DEPDENCIES中缺少某些内容。学生3:rlang和其他一些软件包也一样,在重试ggplot2之前尝试。另外,make:command not found对我来说似乎相当清楚,这可能是它自己的问题,因为它与困扰学生2的依赖性问题无关;或者可能已经有人回答了,我对Mac电脑不熟练。
R version 3.3.3 (2017-03-06) -- "Another Canoe"
Copyright (C) 2017 The R Foundation for Statistical Computing
Platform: x86_64-apple-darwin13.4.0 (64-bit)


> install.packages("ggplot2")
also installing the dependencies ‘digest’, ‘scales’


  There are binary versions available but the source versions are later:
        binary source needs_compilation
digest  0.6.13 0.6.16              TRUE
scales   0.5.0  1.0.0              TRUE
ggplot2  2.2.1  3.0.0             FALSE

Do you want to install from sources the packages which need compilation?
y/n: y
installing the source packages ‘digest’, ‘scales’, ‘ggplot2’

trying URL 'https://cran.rstudio.com/src/contrib/digest_0.6.16.tar.gz'
Content type 'application/x-gzip' length 123969 bytes (121 KB)
==================================================
downloaded 121 KB

trying URL 'https://cran.rstudio.com/src/contrib/scales_1.0.0.tar.gz'
Content type 'application/x-gzip' length 299262 bytes (292 KB)
==================================================
downloaded 292 KB

trying URL 'https://cran.rstudio.com/src/contrib/ggplot2_3.0.0.tar.gz'
Content type 'application/x-gzip' length 2847050 bytes (2.7 MB)
==================================================
downloaded 2.7 MB

* installing *source* package ‘digest’ ...
** package ‘digest’ successfully unpacked and MD5 sums checked
** libs
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c aes.c -o aes.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c crc32.c -o crc32.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c digest.c -o digest.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c init.c -o init.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c md5.c -o md5.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c pmurhash.c -o pmurhash.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c raes.c -o raes.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c sha1.c -o sha1.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c sha2.c -o sha2.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c sha256.c -o sha256.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include    -fPIC  -Wall -mtune=core2 -g -O2  -c xxhash.c -o xxhash.o
clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o digest.so aes.o crc32.o digest.o init.o md5.o pmurhash.o raes.o sha1.o sha2.o sha256.o xxhash.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/3.3/Resources/library/digest/libs
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (digest)
* installing *source* package ‘scales’ ...
** package ‘scales’ successfully unpacked and MD5 sums checked
** libs
clang++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"   -fPIC  -Wall -mtune=core2 -g -O2  -c RcppExports.cpp -o RcppExports.o
clang++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include"   -fPIC  -Wall -mtune=core2 -g -O2  -c colors.cpp -o colors.o
clang++ -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o scales.so RcppExports.o colors.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/3.3/Resources/library/scales/libs
** R
** preparing package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** testing if installed package can be loaded
* DONE (scales)
* installing *source* package ‘ggplot2’ ...
** package ‘ggplot2’ successfully unpacked and MD5 sums checked
** R
** data
*** moving datasets to lazyload DB
** inst
** preparing package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (ggplot2)

The downloaded source packages are in
‘/private/var/folders/16/0m9qg4c57_3ff2sjqj4m8gqr0000gn/T/RtmpenBrUz/downloaded_packages’
R version 3.3.3 (2017-03-06) -- "Another Canoe"
Copyright (C) 2017 The R Foundation for Statistical Computing
Platform: x86_64-apple-darwin13.4.0 (64-bit)


> install.packages("ggplot2")

  There is a binary version available but the source version
  is later:
        binary source needs_compilation
ggplot2  2.2.1  3.0.0             FALSE

installing the source package ‘ggplot2’

trying URL 'https://cran.rstudio.com/src/contrib/ggplot2_3.0.0.tar.gz'
Content type 'application/x-gzip' length 2847050 bytes (2.7 MB)
==================================================
downloaded 2.7 MB

* installing *source* package ‘ggplot2’ ...
** package ‘ggplot2’ successfully unpacked and MD5 sums checked
** R
** data
*** moving datasets to lazyload DB
** inst
** preparing package for lazy loading
Error : object ‘enexprs’ is not exported by 'namespace:rlang'
ERROR: lazy loading failed for package ‘ggplot2’
* removing ‘/Library/Frameworks/R.framework/Versions/3.3/Resources/library/ggplot2’
Warning in install.packages :
  installation of package ‘ggplot2’ had non-zero exit status

The downloaded source packages are in
‘/private/var/folders/tr/f5zb5kf16pxdx4b8qtkw3cc00000gn/T/RtmpiNIZN2/downloaded_packages’
> install.packages("ggplot2")

Warning in install.packages :
  dependencies ‘rgeos’, ‘sf’ are not available
also installing the dependencies ‘fansi’, ‘utf8’, ‘curl’, ‘openssl’, ‘bindr’, ‘pillar’, ‘checkmate’, ‘rstudioapi’, ‘zoo’, ‘memoise’, ‘whisker’, ‘git2r’, ‘fontBitstreamVera’, ‘fontLiberation’, ‘httpuv’, ‘xtable’, ‘sourcetools’, ‘later’, ‘promises’, ‘stringi’, ‘backports’, ‘xfun’, ‘jsonlite’, ‘rex’, ‘httr’, ‘bindrcpp’, ‘glue’, ‘pkgconfig’, ‘Rcpp’, ‘tibble’, ‘tidyselect’, ‘BH’, ‘plogr’, ‘survival’, ‘Formula’, ‘latticeExtra’, ‘acepack’, ‘gridExtra’, ‘data.table’, ‘htmlTable’, ‘viridis’, ‘htmltools’, ‘base64enc’, ‘sp’, ‘mvtnorm’, ‘TH.data’, ‘sandwich’, ‘praise’, ‘devtools’, ‘fontquiver’, ‘gdtools’, ‘htmlwidgets’, ‘purrr’, ‘shiny’, ‘xml2’, ‘SparseM’, ‘MatrixModels’, ‘evaluate’, ‘highr’, ‘markdown’, ‘stringr’, ‘yaml’, ‘rprojroot’, ‘mime’, ‘tinytex’, ‘rlang’, ‘scales’, ‘covr’, ‘dplyr’, ‘ggplot2movies’, ‘hexbin’, ‘Hmisc’, ‘mapproj’, ‘maps’, ‘maptools’, ‘multcomp’, ‘testthat’, ‘vdiffr’, ‘quantreg’, ‘knitr’, ‘rmarkdown’, ‘svglite’


  There are binary versions available but the source versions
  are later:
              binary   source needs_compilation
curl             1.2      3.2              TRUE
openssl        0.9.2    1.0.2              TRUE
checkmate      1.8.1    1.8.5              TRUE
rstudioapi       0.6      0.7             FALSE
zoo           1.7-13    1.8-3              TRUE
memoise        1.0.0    1.1.0             FALSE
git2r         0.15.0   0.23.0              TRUE
httpuv         1.3.3    1.4.5              TRUE
xtable         1.8-2    1.8-3             FALSE
stringi        1.1.1    1.2.4             FALSE
backports      1.0.3    1.1.2             FALSE
jsonlite         1.0      1.5              TRUE
rex            1.1.1    1.1.2             FALSE
httr           1.2.1    1.3.1             FALSE
pkgconfig      2.0.0    2.0.2             FALSE
Rcpp          0.12.6  0.12.18              TRUE
tibble           1.1    1.4.2              TRUE
BH          1.60.0-2 1.66.0-1             FALSE
survival      2.39-5   2.42-6              TRUE
Formula        1.2-1    1.2-3             FALSE
acepack      1.3-3.3    1.4.1              TRUE
gridExtra      2.2.1      2.3             FALSE
data.table     1.9.6   1.11.4              TRUE
htmlTable        1.6     1.12             FALSE
viridis        0.3.4    0.5.1             FALSE
htmltools      0.3.5    0.3.6              TRUE
sp             1.2-3    1.3-1              TRUE
mvtnorm        1.0-5    1.0-8              TRUE
TH.data        1.0-7    1.0-9             FALSE
sandwich       2.3-4    2.5-0             FALSE
devtools      1.12.0   1.13.6              TRUE
htmlwidgets      0.7      1.2             FALSE
purrr          0.2.2    0.2.5              TRUE
shiny         0.13.2    1.1.0             FALSE
xml2           1.0.0    1.2.0              TRUE
SparseM          1.7     1.77              TRUE
evaluate         0.9     0.11             FALSE
highr            0.6      0.7             FALSE
markdown       0.7.7      0.8              TRUE
stringr        1.0.0    1.3.1             FALSE
yaml          2.1.13    2.2.0              TRUE
rprojroot      1.0-2    1.3-2             FALSE
scales         0.4.0    1.0.0              TRUE
covr           2.2.1    3.1.0              TRUE
dplyr          0.5.0    0.7.6              TRUE
hexbin        1.27.1   1.27.2              TRUE
Hmisc         3.17-4    4.1-1              TRUE
mapproj        1.2-4    1.2.6              TRUE
maps           3.1.1    3.3.0              TRUE
maptools      0.8-39    0.9-3              TRUE
multcomp       1.4-6    1.4-8             FALSE
testthat       1.0.2    2.0.0              TRUE
quantreg        5.26     5.36              TRUE
knitr           1.14     1.20             FALSE
rmarkdown        1.0     1.10             FALSE
ggplot2        2.1.0    3.0.0             FALSE

  Binaries will be installed
Packages which are only available in source form, and may need
  compilation of C/C++/Fortran: ‘fansi’ ‘utf8’ ‘sourcetools’
  ‘later’ ‘promises’ ‘bindrcpp’ ‘glue’ ‘tidyselect’ ‘gdtools’
  ‘rlang’ ‘vdiffr’ ‘svglite’
  These will not be installed

The downloaded binary packages are in
/var/folders/vr/mhm7jvp50x1f7t_1ppv6d9rw0000gn/T//Rtmp9juQRH/downloaded_packages
installing the source packages ‘bindr’, ‘pillar’, ‘rstudioapi’, ‘memoise’, ‘fontBitstreamVera’, ‘fontLiberation’, ‘xtable’, ‘stringi’, ‘backports’, ‘xfun’, ‘rex’, ‘httr’, ‘pkgconfig’, ‘BH’, ‘plogr’, ‘Formula’, ‘gridExtra’, ‘htmlTable’, ‘viridis’, ‘TH.data’, ‘sandwich’, ‘fontquiver’, ‘htmlwidgets’, ‘shiny’, ‘evaluate’, ‘highr’, ‘stringr’, ‘rprojroot’, ‘tinytex’, ‘multcomp’, ‘knitr’, ‘rmarkdown’, ‘ggplot2’

* installing *source* package ‘bindr’ ...
** package ‘bindr’ successfully unpacked and MD5 sums checked
** preparing package for lazy loading
* DONE (bindr)
ERROR: dependencies ‘fansi’, ‘rlang’, ‘utf8’ are not available for package ‘pillar’
* removing ‘/Library/Frameworks/R.framework/Versions/3.2/Resources/library/pillar’
Warning in install.packages :
  installation of package ‘pillar’ had non-zero exit status
* installing *source* package ‘rstudioapi’ ...
** package ‘rstudioapi’ successfully unpacked and MD5 sums checked
** preparing package for lazy loading
** testing if installed package can be loaded
* DONE (rstudioapi)
* installing *source* package ‘memoise’ ...
** package ‘memoise’ successfully unpacked and MD5 sums checked
* DONE (memoise)
* installing *source* package ‘fontBitstreamVera’ ...
** package ‘fontBitstreamVera’ successfully unpacked and MD5 sums checked
** inst
** help
No man pages found in package  ‘fontBitstreamVera’ 
* DONE (fontBitstreamVera)
* installing *source* package ‘fontLiberation’ ...
** package ‘fontLiberation’ successfully unpacked and MD5 sums checked
No man pages found in package  ‘fontLiberation’ 
* DONE (fontLiberation)
* installing *source* package ‘xtable’ ...
** package ‘xtable’ successfully unpacked and MD5 sums checked
** testing if installed package can be loaded
* DONE (xtable)
* installing *source* package ‘stringi’ ...
** package ‘stringi’ successfully unpacked and MD5 sums checked
checking for R_HOME... /Library/Frameworks/R.framework/Resources
checking for R... /Library/Frameworks/R.framework/Resources/bin/R
checking for endianness... little
checking for R >= 3.1.0 for C++11 use... yes
checking for R < 3.4.0 for CXX1X flag use... yes
checking for cat... /bin/cat
/Library/Frameworks/R.framework/Resources/bin/config: line 150: make: command not found
/Library/Frameworks/R.framework/Resources/bin/config: line 151: make: command not found
/Library/Frameworks/R.framework/Resources/bin/config: line 152: make: command not found
/Library/Frameworks/R.framework/Resources/bin/config: line 153: make: command not found
/Library/Frameworks/R.framework/Resources/bin/config: line 269: make: command not found
/Library/Frameworks/R.framework/Resources/bin/config: line 150: make: command not found
/Library/Frameworks/R.framework/Resources/bin/config: line 151: make: command not found
/Library/Frameworks/R.framework/Resources/bin/config: line 152: make: command not found
/Library/Frameworks/R.framework/Resources/bin/config: line 153: make: command not found
/Library/Frameworks/R.framework/Resources/bin/config: line 269: make: command not found
/Library/Frameworks/R.framework/Resources/bin/config: line 150: make: command not found
/Library/Frameworks/R.framework/Resources/bin/config: line 151: make: command not found
/Library/Frameworks/R.framework/Resources/bin/config: line 152: make: command not found
/Library/Frameworks/R.framework/Resources/bin/config: line 153: make: command not found
/Library/Frameworks/R.framework/Resources/bin/config: line 269: make: command not found
/Library/Frameworks/R.framework/Resources/bin/config: line 150: make: command not found
/Library/Frameworks/R.framework/Resources/bin/config: line 151: make: command not found
/Library/Frameworks/R.framework/Resources/bin/config: line 152: make: command not found
/Library/Frameworks/R.framework/Resources/bin/config: line 153: make: command not found
/Library/Frameworks/R.framework/Resources/bin/config: line 269: make: command not found
/Library/Frameworks/R.framework/Resources/bin/config: line 150: make: command not found
/Library/Frameworks/R.framework/Resources/bin/config: line 151: make: command not found
/Library/Frameworks/R.framework/Resources/bin/config: line 152: make: command not found
/Library/Frameworks/R.framework/Resources/bin/config: line 153: make: command not found
/Library/Frameworks/R.framework/Resources/bin/config: line 269: make: command not found
/Library/Frameworks/R.framework/Resources/bin/config: line 150: make: command not found
/Library/Frameworks/R.framework/Resources/bin/config: line 151: make: command not found
/Library/Frameworks/R.framework/Resources/bin/config: line 152: make: command not found
/Library/Frameworks/R.framework/Resources/bin/config: line 153: make: command not found
/Library/Frameworks/R.framework/Resources/bin/config: line 269: make: command not found
/Library/Frameworks/R.framework/Resources/bin/config: line 150: make: command not found
/Library/Frameworks/R.framework/Resources/bin/config: line 151: make: command not found
/Library/Frameworks/R.framework/Resources/bin/config: line 152: make: command not found
/Library/Frameworks/R.framework/Resources/bin/config: line 153: make: command not found
/Library/Frameworks/R.framework/Resources/bin/config: line 269: make: command not found
/Library/Frameworks/R.framework/Resources/bin/config: line 150: make: command not found
/Library/Frameworks/R.framework/Resources/bin/config: line 151: make: command not found
/Library/Frameworks/R.framework/Resources/bin/config: line 152: make: command not found
/Library/Frameworks/R.framework/Resources/bin/config: line 153: make: command not found
/Library/Frameworks/R.framework/Resources/bin/config: line 269: make: command not found
/Library/Frameworks/R.framework/Resources/bin/config: line 150: make: command not found
/Library/Frameworks/R.framework/Resources/bin/config: line 151: make: command not found
/Library/Frameworks/R.framework/Resources/bin/config: line 152: make: command not found
/Library/Frameworks/R.framework/Resources/bin/config: line 153: make: command not found
/Library/Frameworks/R.framework/Resources/bin/config: line 269: make: command not found
/Library/Frameworks/R.framework/Resources/bin/config: line 150: make: command not found
/Library/Frameworks/R.framework/Resources/bin/config: line 151: make: command not found
/Library/Frameworks/R.framework/Resources/bin/config: line 152: make: command not found
/Library/Frameworks/R.framework/Resources/bin/config: line 153: make: command not found
/Library/Frameworks/R.framework/Resources/bin/config: line 269: make: command not found
checking for local ICUDT_DIR... icu61/data
checking for gcc... no
checking for cc... no
checking for cl.exe... no
configure: error: in `/private/var/folders/vr/mhm7jvp50x1f7t_1ppv6d9rw0000gn/T/RtmpD45efN/R.INSTALL22546d2eca12/stringi':
configure: error: no acceptable C compiler found in $PATH
See `config.log' for more details
ERROR: configuration failed for package ‘stringi’
* removing ‘/Library/Frameworks/R.framework/Versions/3.2/Resources/library/stringi’
Warning in install.packages :
  installation of package ‘stringi’ had non-zero exit status
* installing *source* package ‘backports’ ...
** package ‘backports’ successfully unpacked and MD5 sums checked
** libs
sh: make: command not found
ERROR: compilation failed for package ‘backports’
* removing ‘/Library/Frameworks/R.framework/Versions/3.2/Resources/library/backports’
Warning in install.packages :
  installation of package ‘backports’ had non-zero exit status
* installing *source* package ‘xfun’ ...
** package ‘xfun’ successfully unpacked and MD5 sums checked
* DONE (xfun)
* installing *source* package ‘rex’ ...
** package ‘rex’ successfully unpacked and MD5 sums checked
** testing if installed package can be loaded
* DONE (rex)
* installing *source* package ‘httr’ ...
** package ‘httr’ successfully unpacked and MD5 sums checked
** testing if installed package can be loaded
* DONE (httr)
* installing *source* package ‘pkgconfig’ ...
** package ‘pkgconfig’ successfully unpacked and MD5 sums checked
** R
** testing if installed package can be loaded
* DONE (pkgconfig)
* installing *source* package ‘BH’ ...
** package ‘BH’ successfully unpacked and MD5 sums checked
** testing if installed package can be loaded
* DONE (BH)
* installing *source* package ‘plogr’ ...
** package ‘plogr’ successfully unpacked and MD5 sums checked
** testing if installed package can be loaded
* DONE (plogr)
* installing *source* package ‘Formula’ ...
** package ‘Formula’ successfully unpacked and MD5 sums checked
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (Formula)
* installing *source* package ‘gridExtra’ ...
** package ‘gridExtra’ successfully unpacked and MD5 sums checked
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (gridExtra)
* installing *source* package ‘TH.data’ ...
** package ‘TH.data’ successfully unpacked and MD5 sums checked
** data
*** moving datasets to lazyload DB
** demo
** inst
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
Warning: package ‘survival’ was built under R version 3.2.5
* DONE (TH.data)
* installing *source* package ‘sandwich’ ...
** package ‘sandwich’ successfully unpacked and MD5 sums checked
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (sandwich)
* installing *source* package ‘htmlwidgets’ ...
** package ‘htmlwidgets’ successfully unpacked and MD5 sums checked
** R
** inst
** preparing package for lazy loading
Failed with error:  ‘there is no package called ‘shiny’’
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (htmlwidgets)
* installing *source* package ‘highr’ ...
** package ‘highr’ successfully unpacked and MD5 sums checked
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (highr)
ERROR: dependency ‘rlang’ is not available for package ‘ggplot2’
* removing ‘/Library/Frameworks/R.framework/Versions/3.2/Resources/library/ggplot2’
Warning in install.packages :
  installation of package ‘ggplot2’ had non-zero exit status
ERROR: dependency ‘ggplot2’ is not available for package ‘viridis’
* removing ‘/Library/Frameworks/R.framework/Versions/3.2/Resources/library/viridis’
Warning in install.packages :
  installation of package ‘viridis’ had non-zero exit status
* installing *source* package ‘fontquiver’ ...
** package ‘fontquiver’ successfully unpacked and MD5 sums checked
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (fontquiver)
ERROR: dependencies ‘sourcetools’, ‘later’, ‘promises’, ‘rlang’ are not available for package ‘shiny’
* removing ‘/Library/Frameworks/R.framework/Versions/3.2/Resources/library/shiny’
Warning in install.packages :
  installation of package ‘shiny’ had non-zero exit status
ERROR: dependencies ‘glue’, ‘stringi’ are not available for package ‘stringr’
* removing ‘/Library/Frameworks/R.framework/Versions/3.2/Resources/library/stringr’
Warning in install.packages :
  installation of package ‘stringr’ had non-zero exit status
ERROR: dependency ‘backports’ is not available for package ‘rprojroot’
* removing ‘/Library/Frameworks/R.framework/Versions/3.2/Resources/library/rprojroot’
Warning in install.packages :
  installation of package ‘rprojroot’ had non-zero exit status
* installing *source* package ‘tinytex’ ...
** package ‘tinytex’ successfully unpacked and MD5 sums checked
** R
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (tinytex)
* installing *source* package ‘multcomp’ ...
** package ‘multcomp’ successfully unpacked and MD5 sums checked
** R
** data
*** moving datasets to lazyload DB
** demo
** inst
** preparing package for lazy loading
Warning: package ‘mvtnorm’ was built under R version 3.2.3
Warning: package ‘survival’ was built under R version 3.2.5
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
Warning: package ‘mvtnorm’ was built under R version 3.2.3
Warning: package ‘survival’ was built under R version 3.2.5
* DONE (multcomp)
ERROR: dependency ‘stringr’ is not available for package ‘evaluate’
* removing ‘/Library/Frameworks/R.framework/Versions/3.2/Resources/library/evaluate’
Warning in install.packages :
  installation of package ‘evaluate’ had non-zero exit status
ERROR: dependencies ‘evaluate’, ‘stringr’ are not available for package ‘knitr’
* removing ‘/Library/Frameworks/R.framework/Versions/3.2/Resources/library/knitr’
Warning in install.packages :
  installation of package ‘knitr’ had non-zero exit status
ERROR: dependencies ‘stringr’, ‘knitr’ are not available for package ‘htmlTable’
* removing ‘/Library/Frameworks/R.framework/Versions/3.2/Resources/library/htmlTable’
Warning in install.packages :
  installation of package ‘htmlTable’ had non-zero exit status
ERROR: dependencies ‘knitr’, ‘evaluate’, ‘rprojroot’, ‘stringr’ are not available for package ‘rmarkdown’
* removing ‘/Library/Frameworks/R.framework/Versions/3.2/Resources/library/rmarkdown’
Warning in install.packages :
  installation of package ‘rmarkdown’ had non-zero exit status

The downloaded source packages are in
‘/private/var/folders/vr/mhm7jvp50x1f7t_1ppv6d9rw0000gn/T/Rtmp9juQRH/downloaded_packages’