Python 将Cython指向C源文件
我有一个混合Python、Cython和C的项目,安排如下:Python 将Cython指向C源文件,python,c,cython,Python,C,Cython,我有一个混合Python、Cython和C的项目,安排如下: root |- src |- foo foo.c |- name name.pxd name.pyx |- include |- foo foo.h setup.py 内容非常简单: foo.h: void add(int, double *, double *, double *); f
root
|- src
|- foo
foo.c
|- name
name.pxd
name.pyx
|- include
|- foo
foo.h
setup.py
内容非常简单:
foo.h:
void add(int, double *, double *, double *);
foo.c:
#include "foo/foo.h"
void add(int N, double * A, double * B, double * C) {
for (int i = 0; i < N; i++) C[i] = A[i]+B[i];
}
name.pyx:
import numpy as np
cimport numpy as np
cpdef cython_add(np.ndarray[np.double_t, ndim=1] A,
np.ndarray[np.double_t, ndim=1] B):
cdef int N = min(A.shape[0], B.shape[0])
cdef np.ndarray C = np.ndarray([N],dtype=np.double)
add(N, <double*> A.data, <double*> B.data, <double*> C.data)
return C
并使用以下命令进行编译:
CFLAGS="-I/path/to/root/include" python setup.py build_ext -i
它编译得很好,除了在python解释器中尝试导入名称时,我得到以下结果:
ImportError: dlopen(./name.so, 2): Symbol not found: _add
Referenced from: ./name.so
Expected in: dynamic lookup
我认为这意味着,即使所有内容都已编译,Cython实际上并没有将正确的文件链接在一起。我错过了什么?结果我不得不改变两件事。我忘了告诉name.pyx导入name.pxd。因此,我不得不在name.pyx的顶部添加这一行: 当我在name.pyx本身中包含distutils头信息时,它也起作用,所以将这些行放在name.pyx的最顶端: 并将setup.py更改为:
CFLAGS="-I/path/to/root/include" python setup.py build_ext -i
ImportError: dlopen(./name.so, 2): Symbol not found: _add
Referenced from: ./name.so
Expected in: dynamic lookup
from name cimport add
#distutils: language = c
#distutils: sources = src/foo/foo.c
from distutils.core import setup
from distutils.extension import Extension
from Cython.Build import cythonize
from numpy import get_include
extensions = [
Extension("name", ["name/name.pyx"],
include_dirs = ["include", get_include()])
]
setup(
name = "name",
ext_modules = cythonize(extensions)
)