R将用户定义的函数应用于数据帧的所有行
我正在努力通过数据帧中列的行进行循环,然后使用当前行定义将在函数中使用的参数。以下是示例数据帧:R将用户定义的函数应用于数据帧的所有行,r,apply,R,Apply,我正在努力通过数据帧中列的行进行循环,然后使用当前行定义将在函数中使用的参数。以下是示例数据帧: df <- structure(list(child = c("A268", "A268497", "A268497BOX", "A268497BOX2", "A268497BOX218", "A277", "A277A79", "A277A79091", "A277A790911", "A277A79091144", "A492", "A492586", "A492586BOX", "
df <-
structure(list(child = c("A268", "A268497", "A268497BOX", "A268497BOX2",
"A268497BOX218", "A277", "A277A79", "A277A79091", "A277A790911",
"A277A79091144", "A492", "A492586", "A492586BOX", "A492586BOX1",
"A492586BOX144", "A492A69", "A492A69027", "A492A690271", "A492A69027144",
"A492A6902715K", "A492A6902719Y", "A492A690271BH", "A492A690271BI",
"A492A690271CQ", "A492A690271CS", "A492A690271CT", "A492A690271CU",
"A492A690271CV", "A492A690271CW", "A492A690271CX", "A492A690271CY",
"A492A690271DA", "A492A69028", "A492A690281", "A492A69028144",
"A492A69402", "A492A694021", "A492A69402144", "A492A70", "A492A70033",
"A492A700331", "A492A70033144", "A492A700332", "A492A70033244",
"A492A70034", "A492A700341", "A492A70034144", "A492A70035", "A492A700351",
"A492A70035144"), clvl = c(2, 3, 4, 5, 6, 2, 3, 4, 5, 6, 2, 3,
4, 5, 6, 3, 4, 5, 6, 6, 6, 6, 6, 6, 6, 6, 6, 6, 6, 6, 6, 6, 4,
5, 6, 4, 5, 6, 3, 4, 5, 6, 5, 6, 4, 5, 6, 4, 5, 6), parent = c("A",
"A268", "A268497", "A268497BOX", "A268497BOX2", "A", "A277",
"A277A79", "A277A79091", "A277A790911", "A", "A492", "A492586",
"A492586BOX", "A492586BOX1", "A492", "A492A69", "A492A69027",
"A492A690271", "A492A690271", "A492A690271", "A492A690271", "A492A690271",
"A492A690271", "A492A690271", "A492A690271", "A492A690271", "A492A690271",
"A492A690271", "A492A690271", "A492A690271", "A492A690271", "A492A69",
"A492A69028", "A492A690281", "A492A69", "A492A69402", "A492A694021",
"A492", "A492A70", "A492A70033", "A492A700331", "A492A70033",
"A492A700332", "A492A70", "A492A70034", "A492A700341", "A492A70",
"A492A70035", "A492A700351"), plvl = c(1, 2, 3, 4, 5, 1, 2, 3,
4, 5, 1, 2, 3, 4, 5, 2, 3, 4, 5, 5, 5, 5, 5, 5, 5, 5, 5, 5, 5,
5, 5, 5, 3, 4, 5, 3, 4, 5, 2, 3, 4, 5, 4, 5, 3, 4, 5, 3, 4, 5
)), row.names = c(NA, 50L), class = "data.frame")
假设
child
(或pathString
)中的字符数将继续增加,如数据共享中所示,一种方法是使用purr::accumulate
,它允许从以前的输出中获取输入并按组应用
library(dplyr)
df %>%
group_by(gr = cumsum(c(TRUE, diff(nchar(child)) < 0))) %>%
mutate(ans = purrr::accumulate(pathString, ~sub(".*(/.*)",paste0(.x, "\\1"),.y)))
# child pathString gr ans
# <chr> <chr> <int> <chr>
# 1 A268 A/268 1 A/268
# 2 A268497 A268/497 1 A/268/497
# 3 A268497BOX A268497/BOX 1 A/268/497/BOX
# 4 A268497BOX2 A268497BOX/2 1 A/268/497/BOX/2
# 5 A268497BOX218 A268497BOX2/18 1 A/268/497/BOX/2/18
# 6 A277 A/277 2 A/277
# 7 A277A79 A277/A79 2 A/277/A79
# 8 A277A79091 A277A79/091 2 A/277/A79/091
# 9 A277A790911 A277A79091/1 2 A/277/A79/091/1
#10 A277A79091144 A277A790911/44 2 A/277/A79/091/1/44
我使用下面的代码块成功地完成了它,但是循环需要75-80秒,我想可能有更快的方法:
for(row in 1:nrow(df5)) {
x=df5[row,2] #child
y=df5[row,3] #pathString
g=df5[row,c('gr')]
df5$pathString[df5$gr==g] <- sub(x,y,df5$pathString[df5$gr==g])
df5$child[df5$gr==g] <- sub(x,y,df5$child[df5$gr==g])
}
这就是df4
的制作方法:
df4 <- sqldf("select *, parent || replace(child,parent,'/') AS pathString FROM df ORDER BY child")
df4创建pathString
变量的逻辑是什么?因此必须对df
进行排序?真正的df
有超过35k行,我明天会检查你的答案,然后再返回you@Ibo对这是我在查看预期输出时得出的结论。关于如何达到输出,没有任何共享的逻辑。我使用更广泛的数据样本进行了尝试,但没有生成正确的输出。实际上,我退了一步,编辑了数据示例,这样您就可以访问具有级别的子值和父值(不确定是否有帮助)。如果您应用您的答案,您将看到,gr
在非级别2的任何级别重置时,前斜杠都没有正确创建,此外,在某些情况下,它会从上面的行中添加段,而我们只允许向值添加正斜杠。这是为了创建一个路径,以便我可以创建数据。tree
这是没有人回复的原始帖子。也许有更好的方法来得到最终答案,但我可以做到这一点:我设法找到了一个解决方案,但我相信有一个更聪明的方法!
for(row in 1:nrow(df5)) {
x=df5[row,2] #child
y=df5[row,3] #pathString
g=df5[row,c('gr')]
df5$pathString[df5$gr==g] <- sub(x,y,df5$pathString[df5$gr==g])
df5$child[df5$gr==g] <- sub(x,y,df5$child[df5$gr==g])
}
library(zoo)
df4$gr <- ifelse(df4$clvl==2,df4$child,NA)
df4$gr <- na.locf(df4$gr)
df4 <- sqldf("select *, parent || replace(child,parent,'/') AS pathString FROM df ORDER BY child")