R 如何在一些点之后绘制形状(椭圆或椭圆形)并计算其面积?

R 如何在一些点之后绘制形状(椭圆或椭圆形)并计算其面积?,r,plot,area,ellipse,drawellipse,R,Plot,Area,Ellipse,Drawellipse,我试图画出树木的年轮并计算它们的面积。然而,我注意到,实际上并非所有的环都像圆一样具有对称半径。我有4个半径的数据测量,我想在每个收音机的每个点后面绘制环(或任何类似的形状),如本例所示(此图是在PowerPoint中使用矢量手动完成的): 问题是,在R中,我发现只有使用symbols()函数中的circles选项才能绘制这些环,我得到了以下图形: 使用此R脚本: data <- data.frame( a = c(1,4,5,8, 10), b = c(1, 3,7,9, 10),

我试图画出树木的年轮并计算它们的面积。然而,我注意到,实际上并非所有的环都像圆一样具有对称半径。我有4个半径的数据测量,我想在每个收音机的每个点后面绘制环(或任何类似的形状),如本例所示(此图是在PowerPoint中使用矢量手动完成的):

问题是,在R中,我发现只有使用
symbols()
函数中的
circles
选项才能绘制这些环,我得到了以下图形:

使用此R脚本:

data <- data.frame(
a = c(1,4,5,8, 10),
b = c(1, 3,7,9, 10),
c = c(2, 6, 8, 9 ,10),
d = c(1, 3, 4, 7, 9) )

data$y <- (data$a - data$b)/2 # y position
data$x <- (data$d - data$c)/2 # x position
data$z <- rowMeans(data[,1:4]) # radio length

symbols(x = data$x, y = data$y, circles=data$z, 
        xlim = c(-10, 10)*1.5, ylim = c(-10, 10)*1.5, inches = F, fg = "orange", lwd = 2)

data如果A&B在y轴上,C&D在x轴上,计算椭圆的参数并不困难。我使用
optim()
获取参数(注意:这种方法有微小的错误,比如2.439826e-12)

数据操纵
 # change all data into xy coordinates and make ring-factor
library(reshape2); library(dplyr)

data <- data.frame(
  a = c(1, 4, 5, 8, 10),
  b = c(1, 3, 7, 9, 10) * -1,
  c = c(2, 6, 8, 9, 10) * -1,
  d = c(1, 3, 4, 7, 9) )

data <- t(data)
colnames(data) <- LETTERS[1:ncol(data)]   # ring-factor
df <- melt(data, value.name = "x")        # change into long-form

df$y <- df$x                              # make xy coordinates
df[df$Var1=="a"|df$Var1=="b", "x"] <- 0
df[df$Var1=="c"|df$Var1=="d", "y"] <- 0
#将所有数据更改为xy坐标并生成环系数
图书馆(E2);图书馆(dplyr)

谢谢你的回答。然而,我有一个新的问题来画更多不规则的形状。我已经更新了我的帖子来解释我需要什么。或者你认为创建一个新问题会更好吗?
center <- df %>% group_by(Var2) %>% summarize(sum(x)/2, sum(y)/2) %>% as.data.frame()
opt.f <- function(par, subset, center) {     # target function
  ox <- center[[1]]                          # par[1] and par[2] are ra and rb
  oy <- center[[2]]
  x <- subset$x
  y <- subset$y
  sum(abs((x - ox)^2/par[1]^2 + (y - oy)^2/par[2]^2 - 1))   # from ellipse equation
}

lev <- levels(df$Var2)

## search parameters
res <- sapply(1:length(lev), function(a) 
  optim(c(1,1), opt.f, subset = subset(df, Var2 == lev[a]), 
        center = center[a, 2:3], control = list(reltol = 1.0e-12)))

res  # result. you can get detail by res[,1etc]. values are not 0 but much nearly 0
radian <- function(degree) degree/180*pi
plot.ellipse <- function(ox, oy, ra, rb, phi=0, start=0, end=360, length=100, func=lines, ...) {
  theta <- c(seq(radian(start), radian(end), length=length), radian(end))
  if (phi == 0) {
    func(ra*cos(theta)+ox, rb*sin(theta)+oy, ...)
  } else {
    x <- ra*cos(theta)
    y <- rb*sin(theta)
    phi <- radian(phi)
    cosine <- cos(phi)
    sine <- sin(phi)
    func(cosine*x-sine*y+ox, sine*x+cosine*y+oy, ...)
  }
}
plot(0, type="n", xlim=c(-10, 10), ylim =c(-10, 10), asp=1, xlab="x", ylab="y", axes = F)
axis(1, pos=0);axis(2, pos=0, las=2)
points(df$x, df$y)
for(a in 1:length(lev)) plot.ellipse(ox = center[a, 2], oy = center[a, 3], 
                                     ra = res[,a]$par[1], rb = res[,a]$par[2], length=300)

area <- sapply(res[1,], function(a) pi * a[1] * a[2])