如何在Python接口中运行R代码?
我试图运行下面的代码,我想读csv文件,然后写“sas7bdat”。我试过下面的代码 我们已经在系统上安装了R的必备库如何在Python接口中运行R代码?,r,python-3.x,rpy2,R,Python 3.x,Rpy2,我试图运行下面的代码,我想读csv文件,然后写“sas7bdat”。我试过下面的代码 我们已经在系统上安装了R的必备库 from rpy2 import robjects robjects.r(''' library(haven) data <- read_csv("filename.csv") write_sas(data, "filename.sas7bdat") ''')
from rpy2 import robjects
robjects.r('''
library(haven)
data <- read_csv("filename.csv")
write_sas(data, "filename.sas7bdat")
''')
从rpy2导入对象
robjects.r(“”)
图书馆(避风港)
数据我有在Python Jupyter笔记本中使用R的经验,开始时有点复杂,但确实有效。这里我只是粘贴了我的个人笔记,希望这些帮助:
# Major steps in installing "rpy2":
# Step 1: install R on Jupyter Notebook: conda install -c r r-essentials
# Step 2: install the "rpy2" Python package: pip install rpy2 (you may have to check the version)
# Step 3: create the environment variables: R_HOME, R_USER and R_LIBS_USER
# you can modify these environment variables in the system settings on your windows PC or use codes to set them every time)
# load the rpy2 module after installation
# Then you will be able to enable R cells within the Python Jupyter Notebook
# run this line in your Jupyter Notebook
%load_ext rpy2.ipython
我的工作是用Python编写ggplot2,所以我做到了:
# now use R to access this dataframe and plot it using ggplot2
# tell Jupyter Notebook that you are going to use R in this cell, and for the "test_data" generated using the Python
%%R -i test_data
library(ggplot2)
plot <- ggplot(test_data) +
geom_point(aes(x,y),size = 20)
plot
ggsave('test.png')
#现在使用R访问此数据帧,并使用ggplot2进行打印
#告诉Jupyter Notebook,您将在这个单元格中使用R,并用于使用Python生成的“test_数据”
%%R-i测试数据
图书馆(GG2)
绘图在运行代码之前,请确保haven
和reader
安装在R内核中
from rpy2.robjects.packages import SignatureTranslatedAnonymousPackage
string = """
write_sas <- function(file, col_names = TRUE, write_to){
data <- readr::read_csv(file, col_names = col_names)
haven::write_sas(data, path = write_to)
print(paste("Data is written to ", write_to))
}
"""
rwrap = SignatureTranslatedAnonymousPackage(string, "rwrap")
rwrap.write_sas( file = "https://robjhyndman.com/data/ausretail.csv",
col_names = False,
write_to = "~/Downloads/filename.sas7bdat")
从rpy2.robjects.packages导入SignatureTranslatedAnonymous包
string=”“”
您是否尝试过先在R中运行该命令?也许在R studio中,您可以了解出了什么问题。然后,您可以修复并更新python代码。