使用4D Fortran数组将mpi_发送/接收转换为mpi_散点格式
我目前正在尝试将以下使用4D Fortran数组将mpi_发送/接收转换为mpi_散点格式,fortran,mpi,send,scatterview,Fortran,Mpi,Send,Scatterview,我目前正在尝试将以下mpi\u send/recv调用转换为一个mpi\u scatterv,因为将阵列复制到临时缓冲区并发送临时缓冲区会对性能造成相当大的影响。与等效的串行实现相比,它仍然是值得的,但我希望在不必复制到临时缓冲区的情况下分发工作。看来我想要的功能是mpi_scatterv,但我在实现方面的各种尝试都没有奏效,而且大部分都很混乱 执行mpi_发送/接收调用的代码如下: if(me_image.eq.root_image) then do i = 0, ma
mpi\u send/recv
调用转换为一个mpi\u scatterv
,因为将阵列复制到临时缓冲区并发送临时缓冲区会对性能造成相当大的影响。与等效的串行实现相比,它仍然是值得的,但我希望在不必复制到临时缓冲区的情况下分发工作。看来我想要的功能是mpi_scatterv
,但我在实现方面的各种尝试都没有奏效,而且大部分都很混乱
执行mpi_发送/接收调用的代码如下:
if(me_image.eq.root_image) then
do i = 0, max_proc-1, 1
allocate(temp_dCpqdR(3*nat_sl, 3*nat_sl, n_pairs(i+1), 3))
do j = 1, n_pairs(i+1), 1
temp_dCpqdR(:,:,j,:) = dCpqdR(:,:,j+offset,:)
end do
offset = offset + n_pairs(i+1)
if(i.ne.0) then
call mpi_send(temp_dCpqdR, 3*nat_sl*3*nat_sl*3*n_pairs(i+1), mpi_double_precision,&
i, 0, intra_image_comm,ierr)
call mpi_send(Cpq, 3*nat_sl*3*nat_sl, mpi_double_precision,&
i, 1, intra_image_comm,ierr)
call mpi_send(eigenvalues, 3*nat_sl, mpi_double_precision,&
i, 2, intra_image_comm,ierr)
else
my_dCpqdR(:,:,:,:) = temp_dCpqdR(:,:,:,:)
end if
deallocate(temp_dCpqdR)
end do
else
if(me_image.le.(max_proc-1)) then
call mpi_recv(my_dCpqdR,& ! Buffer
3*nat_sl*3*nat_sl*3*n_pairs(me_image+1),& ! Count
mpi_double_precision,& ! Type
0,& ! Source
0,& ! Tag
intra_image_comm,& ! Communicator
rstatus,& ! Status var
ierr) ! Error flag
call mpi_recv(Cpq,& ! Buffer
3*nat_sl*3*nat_sl,& ! Count
mpi_double_precision,& ! Type
0,& ! Source
1,& ! Tag
intra_image_comm,& ! Communicator
rstatus,& ! Status var
ierr) ! Error flag
call mpi_recv(eigenvalues,& ! Buffer
3*nat_sl,& ! Count
mpi_double_precision,& ! Type
0,& ! Source
2,& ! Tag
intra_image_comm,& ! Communicator
rstatus,& ! Status var
ierr) ! Error flag
end if
end if
我自己也尝试过将上面的代码翻译成scatterv调用,但我不知道该怎么做。我想我需要像这样的台词:
call mpi_type_create_subarray(4, (/ nat_sl, nat_sl, nat, 3 /), (/nat_sl, nat_sl, n_pairs(me_image+1), 3/),&
(/0, 0, 0, 0/), mpi_order_fortran, mpi_double_precision, subarr_typ, ierr)
call mpi_type_commit(subarr_typ, ierr)
及
我已经读到我需要设置区段,所以我实现它们如下:
extent = 3*nat_sl*3*nat_sl*3*n_pairs(me_image+1)
call MPI_Type_create_resized(subarr_typ, 0, extent, resized_subarr, ierr)
call MPI_Type_commit(resized_subarr, ierr)
但这给了我很多错误,包括
[MathBook Pro:58100] *** An error occurred in MPI_Type_create_subarray
[MathBook Pro:58100] *** reported by process [2560884737,2314885530279477248]
[MathBook Pro:58100] *** on communicator MPI_COMM_WORLD
[MathBook Pro:58100] *** MPI_ERR_ARG: invalid argument of some other kind
[MathBook Pro:58100] *** MPI_ERRORS_ARE_FATAL (processes in this communicator will now abort,
[MathBook Pro:58100] *** and potentially your MPI job)
无论如何,我确信错误是在我处理内存布局的方式上。如果您需要我提供更多信息,请告诉我,我期待着您的任何建议
[MathBook Pro:58100] *** An error occurred in MPI_Type_create_subarray
[MathBook Pro:58100] *** reported by process [2560884737,2314885530279477248]
[MathBook Pro:58100] *** on communicator MPI_COMM_WORLD
[MathBook Pro:58100] *** MPI_ERR_ARG: invalid argument of some other kind
[MathBook Pro:58100] *** MPI_ERRORS_ARE_FATAL (processes in this communicator will now abort,
[MathBook Pro:58100] *** and potentially your MPI job)