Can';t在R中安装插入符号包(在我的Linux机器中)
尝试在R中安装插入符号包时,我遇到以下错误Can';t在R中安装插入符号包(在我的Linux机器中),linux,r,gnu,suse,r-caret,Linux,R,Gnu,Suse,R Caret,尝试在R中安装插入符号包时,我遇到以下错误 g++: error: /tmp/Rtmp2Tos7n/R.INSTALL2e6e30153a74/nloptr/nlopt-2.4.2/lib/libnlopt_cxx.a: No such file or directory make: *** [nloptr.so] Error 1 ERROR: compilation failed for package ‘nloptr’ * removing ‘/rmt/
g++: error: /tmp/Rtmp2Tos7n/R.INSTALL2e6e30153a74/nloptr/nlopt-2.4.2/lib/libnlopt_cxx.a:
No such file or directory make: *** [nloptr.so] Error 1
ERROR: compilation failed for package ‘nloptr’
* removing ‘/rmt/csfiles/pgrads/mava290/R/x86_64-suse-linux-gnu-library/3.1/nloptr’
Warning in install.packages :
installation of package ‘nloptr’ had non-zero exit status
ERROR: dependency ‘nloptr’ is not available for package ‘lme4’
* removing ‘/rmt/csfiles/pgrads/mava290/R/x86_64-suse-linux-gnu-library/3.1/lme4’
Warning in install.packages :
installation of package ‘lme4’ had non-zero exit status
ERROR: dependency ‘lme4’ is not available for package ‘pbkrtest’
* removing ‘/rmt/csfiles/pgrads/mava290/R/x86_64-suse-linux-gnu-library/3.1/pbkrtest’
Warning in install.packages :
installation of package ‘pbkrtest’ had non-zero exit status
ERROR: dependency ‘lme4’ is not available for package ‘BradleyTerry2’
* removing ‘/rmt/csfiles/pgrads/mava290/R/x86_64-suse-linux-gnu-library/3.1/BradleyTerry2’
Warning in install.packages :
installation of package ‘BradleyTerry2’ had non-zero exit status
ERROR: dependency ‘pbkrtest’ is not available for package ‘car’
* removing ‘/rmt/csfiles/pgrads/mava290/R/x86_64-suse-linux-gnu-library/3.1/car’
Warning in install.packages :
installation of package ‘car’ had non-zero exit status
ERROR: dependencies ‘car’, ‘BradleyTerry2’ are not available for package ‘caret’
* removing ‘/rmt/csfiles/pgrads/mava290/R/x86_64-suse-linux-gnu-library/3.1/caret’
Warning in install.packages :
installation of package ‘caret’ had non-zero exit status
The downloaded source packages are in
‘/tmp/RtmpG9dYqn/downloaded_packages’
我研究了另一个有类似问题的问题
这个问题的解决方案是首先安装每个依赖项,但它们都有相同的错误消息。例如:
>install.packages('nloptr')
g++: error: /tmp/RtmpgEn54A/R.INSTALL7015350f0d03/nloptr/nlopt-2.4.2/lib/libnlopt_cxx.a: No such file or directory
make: *** [nloptr.so] Error 1
ERROR: compilation failed for package ‘nloptr’
* removing ‘/rmt/csfiles/pgrads/mava290/R/x86_64-suse-linux-gnu-library/3.1/nloptr’
Warning in install.packages :
installation of package ‘nloptr’ had non-zero exit status
The downloaded source packages are in
‘/tmp/RtmpG9dYqn/downloaded_packages’
我还尝试更改了repos
ie.install.packages('caret',repos')http://cran.rstudio.com/)
但它也不起作用
我的会话信息如下所示:
> sessionInfo()
R version 3.1.2 (2014-10-31)
Platform: x86_64-suse-linux-gnu (64-bit)
locale:
[1] LC_CTYPE=en_GB.UTF-8 LC_NUMERIC=C
[3] LC_TIME=en_GB.UTF-8 LC_COLLATE=en_GB.UTF-8
[5] LC_MONETARY=en_GB.UTF-8 LC_MESSAGES=en_GB.UTF-8
[7] LC_PAPER=en_GB.UTF-8 LC_NAME=C
[9] LC_ADDRESS=C LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_GB.UTF-8 LC_IDENTIFICATION=C
attached base packages:
[1] stats graphics grDevices utils datasets methods base
loaded via a namespace (and not attached):
[1] tools_3.1.2
我希望先补充一点意见。2015年1月28日,github中的nloptr包出现错误,可能破坏了编译。我使用了一种变通方法,使用命令从旧版本安装
install.packages("http://cran.r-project.org/src/contrib/Archive/nloptr/nloptr_1.0.0.tar.gz",
repos=NULL, type="source")
如本R帮助论坛所述: 将该行添加到src/Makevars文件
mv .libs lib; \
中间
make install; \
ls | grep -v ^include$$ | grep -v ^lib$$ | xargs rm -rf; \
这将删除编译错误,您将能够安装nloptr包。我已经对nloptr_1.0.0.tar.gz进行了测试。我最近也遇到了nlopt的问题。通过从YaST(或您首选的软件包管理器)安装nlopt-devel及其相关依赖项,可以轻松解决此问题。我通过从synaptic安装第一个“car”(将过滤器与“cran-car”一起使用)来解决此问题。 然后我用rstudio安装了“插入符号”,但我想它也适用于R。 希望有帮助,
关于你是第一次安装nlopt库的头吗?@Pascal:我尝试使用命令
install.packages(“nloptr”,repos=”安装它,如本网站所示http://R-Forge.R-project.org)
。这还不够吗?我使用的是linuxNo,如果您没有在Linux系统中安装nlopt库的头文件,则不是这样。在我的机器(Linux Debian)上,有一个libnopt dev包。我相信这就是编译失败的原因,在安装R包之前必须先安装它(使用YaST之类的包管理器,而不是R)。如果您无法找到其他方法,则可能会为您安装依赖项。