R 晶格中跨面板的条件层
我想在一个带有两个面板的格子R 晶格中跨面板的条件层,r,lattice,trellis,R,Lattice,Trellis,我想在一个带有两个面板的格子stripplot中绘制两种不同条件下的单个主题的意思。我还想添加我已计算并存储在单独数据框中的受试者置信区间。我试图用latticeExtra的层函数覆盖这些置信区间。当我添加层时,两组间隔显示在两个面板上(如下面的代码和第一幅图像所示),或者如果我在层命令中将[下标]添加到x和y(如下面的第二个代码剪辑和图像所示),两组间隔仅显示在第一个面板上。如何在适当的面板上显示适当的间隔 library(latticeExtra) raw_data <- data.
stripplot
中绘制两种不同条件下的单个主题的意思。我还想添加我已计算并存储在单独数据框中的受试者置信区间。我试图用latticeExtra的层
函数覆盖这些置信区间。当我添加层时,两组间隔显示在两个面板上(如下面的代码和第一幅图像所示),或者如果我在层
命令中将[下标]
添加到x和y(如下面的第二个代码剪辑和图像所示),两组间隔仅显示在第一个面板上。如何在适当的面板上显示适当的间隔
library(latticeExtra)
raw_data <- data.frame(subject = rep(1:6, 4), cond1 = as.factor(rep(1:2, each = 12)), cond2 = rep(rep(c("A", "B"), each = 6), 2), response = c(2:7, 6:11, 3:8, 7:12))
summary_data <- data.frame(cond1 = as.factor(rep(1:2, each = 2)), cond2 = rep(c("A", "B"), times = 2), mean = aggregate(response ~ cond2 * cond1, raw_data, mean)$response, within_ci = c(0.57, 0.54, 0.6, 0.63))
summary_data$lci <- summary_data$mean - summary_data$within_ci
summary_data$uci <- summary_data$mean + summary_data$within_ci
subject_stripplot <- stripplot(response ~ cond1 | cond2, groups = subject, data = raw_data,
panel = function(x, y, ...) {
panel.stripplot(x, y, type = "b", lty = 2, ...)
panel.average(x, y, fun = mean, lwd = 2, col = "black", ...) # plot line connecting means
}
)
addWithinCI <- layer(panel.segments(x0 = cond1, y0 = lci, x1 = cond1, y1 = uci, subscripts = TRUE), data = summary_data, under = FALSE)
plot(subject_stripplot + addWithinCI)
库(latticeExtra)
原始数据一种可能的解决方案是打印条带图(例如,在png
或任何其他图形设备内),然后使用网格焦点修改每个子面板
## display stripplot
print(subject_stripplot)
## loop over grops
for (i in c("A", "B")) {
# subset of current group
dat <- subset(summary_data, cond2 == i)
# add intervals to current panel
trellis.focus(name = "panel", column = ifelse(i == "A", 1, 2), row = 1)
panel.segments(x0 = dat$cond1, y0 = dat$lci,
x1 = dat$cond1, y1 = dat$uci, subscripts = TRUE)
trellis.unfocus()
}
一种可能的解决方案是打印
条带图(例如,在png
或任何其他图形设备内),然后使用grillis.focus
修改每个子面板
## display stripplot
print(subject_stripplot)
## loop over grops
for (i in c("A", "B")) {
# subset of current group
dat <- subset(summary_data, cond2 == i)
# add intervals to current panel
trellis.focus(name = "panel", column = ifelse(i == "A", 1, 2), row = 1)
panel.segments(x0 = dat$cond1, y0 = dat$lci,
x1 = dat$cond1, y1 = dat$uci, subscripts = TRUE)
trellis.unfocus()
}
另一个不需要latticeExtra的解决方案(来自Duncan Mackay):
summary_data$cond3另一个不需要latticeExtra的解决方案(来自Duncan Mackay):
summary_数据$cond3
p_seg <- xyplot(lci ~ cond1 | cond2, data = summary_data, ylim = c(1, 13),
panel = function(...) {
# lower and upper y values
y0 <- list(summary_data$lci[c(1, 3)], summary_data$lci[c(2, 4)])
y1 <- list(summary_data$uci[c(1, 3)], summary_data$uci[c(2, 4)])
# insert vertical lines depending on current panel
panel.segments(x0 = 1:2, x1 = 1:2,
y0 = y0[[panel.number()]],
y1 = y1[[panel.number()]])
})
p_comb <- subject_stripplot +
as.layer(p_seg)
# print(p_comb)
summary_data$cond3 <- sapply(summary_data$cond2, pmatch, LETTERS)
mypanel <- function(x, y, ..., lci, uci, scond1, scond3, groups, type, lty){
pnl = panel.number()
panel.xyplot(x, y, ..., groups = groups, type = type, lty = lty)
panel.average(x, y, horizontal = FALSE, col = "black", lwd = 3)
panel.segments(x0 = scond1[scond3 == pnl],
y0 = lci[scond3 == pnl],
x1 = scond1[scond3 == pnl],
y1 = uci[scond3 == pnl])
}
with(summary_data,
stripplot(response ~ cond1 | cond2, data = raw_data,
groups = subject,
lci = lci,
uci = uci,
scond1 = summary_data$cond1,
scond3 = cond3,
type = "b",
lty = 2,
panel = mypanel)
)