Javascript 如何将样式/CSS数据从外部JSON文件导入Cytoscape.js?
我有一个在桌面Cytoscape应用程序中可视化的网络),网络数据导出为Javascript 如何将样式/CSS数据从外部JSON文件导入Cytoscape.js?,javascript,css,json,promise,cytoscape.js,Javascript,Css,Json,Promise,Cytoscape.js,我有一个在桌面Cytoscape应用程序中可视化的网络),网络数据导出为.cyjs文件(尽管有后缀,它是一个JSON文件),而样式数据(这些数据的格式)同样导出为.JSON文件 我可以将theoe数据加载到本地Web服务器中运行的Cytoscape.js中——手动将样式数据添加到HTML文件中。但是,我不知道如何直接从style.json文件加载这些样式数据 更新:感谢@jaromanda-x和@maxkfranz在下面提供的解决方案,我已经发布了一个答案(如下),在我的同伴研究博客文章中有更详
.cyjs
文件(尽管有后缀,它是一个JSON文件),而样式数据(这些数据的格式)同样导出为.JSON
文件
我可以将theoe数据加载到本地Web服务器中运行的Cytoscape.js中——手动将样式数据添加到HTML文件中。但是,我不知道如何直接从style.json
文件加载这些样式数据
更新:感谢@jaromanda-x和@maxkfranz在下面提供的解决方案,我已经发布了一个答案(如下),在我的同伴研究博客文章中有更详细的描述
cytoscape_js.html
<HTML xmlns="http://www.w3.org/1999/xhtml" lang="en-us">
<HEAD>
<meta charset="utf-8" />
<style>
#cy {
width: 80%;
height: 80%;
position: absolute;
}
</style>
<script src='https://cdnjs.cloudflare.com/ajax/libs/cytoscape/3.9.0/cytoscape.min.js'></script>
<script src='https://cdnjs.cloudflare.com/ajax/libs/jquery/3.4.1/jquery.js'></script>
</HEAD>
<BODY>
<div id='cy'></div>
<script>
var json = $.getJSON("data.json")
.done(function(data){
var cy = cytoscape({
container: document.getElementById('cy'),
elements: data.elements,
style : [ {
"selector" : "node",
"css" : {
"text-valign" : "center",
"text-halign" : "center",
"font-family" : "SansSerif.plain",
"font-weight" : "normal",
"background-color" : "rgb(204,255,255)",
"border-width" : 1.5,
"height" : 35.0,
"width" : 75.0,
"border-opacity" : 1.0,
"color" : "rgb(0,0,0)",
"border-color" : "rgb(0,153,255)",
"text-opacity" : 1.0,
"background-opacity" : 1.0,
"font-size" : 12,
"shape" : "ellipse",
"content" : "data(src_node)"
}
}, {
"selector" : "node:selected",
"css" : {
"background-color" : "rgb(255,255,0)"
}
}, {
"selector" : "edge",
"css" : {
"color" : "rgb(0,0,0)",
"source-arrow-shape" : "none",
"font-family" : "Dialog.plain",
"font-weight" : "normal",
"target-arrow-color" : "rgb(0,0,0)",
"width" : 2.0,
"source-arrow-color" : "rgb(0,0,0)",
"line-color" : "rgb(132,132,132)",
'opacity': 0.5,
"line-style" : "solid",
"font-size" : 12,
"text-opacity" : 1.0,
"target-arrow-shape" : "triangle",
"content" : "data(pathway)",
'curve-style': 'bezier'
}
} ],
});
});
</script>
</BODY>
</HTML>
<!DOCTYPE html>
<HTML xmlns="http://www.w3.org/1999/xhtml" lang="en-us">
<HEAD>
<meta charset="utf-8" />
<title>[Cytoscape.js] Glycolysis + TCA Cycle</title>
<style>
#cy {
width: 100%;
height: 100%;
position: absolute;
top: 110px;
left: 0px;
bottom: 0px;
left: 0px;
}
</style>
<script src='https://cdnjs.cloudflare.com/ajax/libs/cytoscape/3.9.0/cytoscape.min.js'></script>
<script src='https://cdnjs.cloudflare.com/ajax/libs/jquery/3.4.1/jquery.js'></script>
</HEAD>
<BODY>
<div id='cy'></div>
<script>
// ==========================================================================
// APPROACH #1:
Promise.all([
fetch('relations2-glycolysis+tca.tsv.cyjs').then(res => res.json()),
fetch('styles.json').then(res => res.json())
]).then(([{elements}, [{style}]]) => {
cytoscape({
container: document.getElementById('cy'),
elements,
style,
// END, APPROACH #1-SPECIFIC CODE
// Note that we need, here, the (non-edited) Cytoscape-exported "styles.json" file.
// ==========================================================================
// ==========================================================================
// APPROACH #2: UNCOMMENT THIS (AND COMMENT APPROACH #1 LINES ABOVE):
// var json = $.getJSON('relations2-glycolysis+tca.tsv.cyjs')
// .done(function(data){
// var cy = cytoscape({
// container: document.getElementById('cy'),
// elements: data.elements,
// style: fetch('styles-edited.json').then(res => res.json()).then(json => json.style),
// END, APPROACH #2-SPECIFIC CODE
// Notes.
// 1. Here we need the (edited) Cytoscape-exported "styles.json" file: I
// needed to manually delete the leading "[ " at the top, and the lagging
// " ]" at the bottom of the Cytoscape-exported "styles.json" file:
// 2. This also works, but is not needed ("elements: data.elements" works):
// elements: fetch('relations2-glycolysis+tca.tsv.cyjs').then(res => res.json()).then(json => json.elements),
// ==========================================================================
// In either case, above, I added "curve-style" : "bezier" to the edge properties
// in the styles-edited.json file, to enable the display of the edges as arrows.
// ======================================================================
layout: {
name: 'preset',
zoom: 1.2,
pan: { x: 950, y: 2150 },
rows: 1
},
minZoom: 5e-1,
maxZoom: 0.25e1,
zoomingEnabled: true,
userZoomingEnabled: true,
panningEnabled: true,
userPanningEnabled: true,
boxSelectionEnabled: false,
selectionType: 'single',
touchTapThreshold: 8,
desktopTapThreshold: 4,
autolock: false,
autoungrabify: false,
autounselectify: false,
// Rendering options:
headless: false,
styleEnabled: true,
hideEdgesOnViewport: false,
hideLabelsOnViewport: false,
textureOnViewport: false,
motionBlur: false,
motionBlurOpacity: 0.2,
wheelSensitivity: 0.1,
pixelRatio: 'auto'
});
});
</script>
</BODY>
</HTML>
styles.json
{
"elements" : {
"nodes" : [ {
"data" : {
"id" : "163",
"shared_name" : "c00103_glycolysis",
"src_node" : "c00103",
"name" : "c00103_glycolysis",
"x" : 200,
"y" : 60,
"tgt_node" : "c00103",
"SUID" : 163,
"selected" : false
},
"position" : {
"x" : -29.497192046634154,
"y" : -1709.4156554007204
},
"selected" : false
}, {
"data" : {
"id" : "162",
"shared_name" : "5.4.2.2_glycolysis",
"src_node" : "5.4.2.2",
"name" : "5.4.2.2_glycolysis",
"x" : 200,
"y" : 70,
"tgt_node" : "5.4.2.2",
"SUID" : 162,
"selected" : false
},
"position" : {
"x" : -29.497192046634154,
"y" : -1579.4552719836647
},
"selected" : false
}, {
"data" : {
"id" : "161",
"shared_name" : "c00668_glycolysis",
"src_node" : "c00668",
"name" : "c00668_glycolysis",
"x" : 200,
"y" : 80,
"tgt_node" : "c00668",
"SUID" : 161,
"selected" : false
},
"position" : {
"x" : -29.497192046634154,
"y" : -1449.494888566609
},
"selected" : false
} ],
"edges" : [ {
"data" : {
"id" : "361",
"source" : "163",
"target" : "162",
"shared_name" : "c00103_glycolysis () 5.4.2.2_glycolysis",
"vis" : "vis",
"shared_interaction" : "",
"name" : "c00103_glycolysis () 5.4.2.2_glycolysis",
"interaction" : "",
"pathway" : 1,
"SUID" : 361,
"wt" : "wt",
"BEND_MAP_ID" : 74,
"selected" : false
},
"selected" : false
}, {
"data" : {
"id" : "360",
"source" : "162",
"target" : "161",
"shared_name" : "5.4.2.2_glycolysis () c00668_glycolysis",
"vis" : "vis",
"shared_interaction" : "",
"name" : "5.4.2.2_glycolysis () c00668_glycolysis",
"interaction" : "",
"pathway" : 1,
"SUID" : 360,
"wt" : "wt",
"BEND_MAP_ID" : 76,
"selected" : false
},
"selected" : false
}, {
"data" : {
"id" : "359",
"source" : "162",
"target" : "163",
"shared_name" : "5.4.2.2_glycolysis () c00103_glycolysis",
"vis" : "vis",
"shared_interaction" : "",
"name" : "5.4.2.2_glycolysis () c00103_glycolysis",
"interaction" : "",
"pathway" : 1,
"SUID" : 359,
"wt" : "wt",
"BEND_MAP_ID" : 77,
"selected" : false
},
"selected" : false
}, {
"data" : {
"id" : "358",
"source" : "161",
"target" : "162",
"shared_name" : "c00668_glycolysis () 5.4.2.2_glycolysis",
"vis" : "vis",
"shared_interaction" : "",
"name" : "c00668_glycolysis () 5.4.2.2_glycolysis",
"interaction" : "",
"pathway" : 1,
"SUID" : 358,
"wt" : "wt",
"BEND_MAP_ID" : 78,
"selected" : false
},
"selected" : false
} ]
}
}
[ {
"format_version" : "1.0",
"generated_by" : "cytoscape-3.7.1",
"target_cytoscapejs_version" : "~2.1",
"title" : "victoria_0",
"style" : [ {
"selector" : "node",
"css" : {
"text-valign" : "center",
"text-halign" : "center",
"font-family" : "SansSerif.plain",
"font-weight" : "normal",
"background-color" : "rgb(204,255,255)",
"border-width" : 1.5,
"height" : 35.0,
"width" : 75.0,
"border-opacity" : 1.0,
"color" : "rgb(0,0,0)",
"border-color" : "rgb(0,153,255)",
"text-opacity" : 1.0,
"background-opacity" : 1.0,
"font-size" : 12,
"shape" : "ellipse",
"content" : "data(src_node)"
}
}, {
"selector" : "node:selected",
"css" : {
"background-color" : "rgb(255,255,0)"
}
}, {
"selector" : "edge",
"css" : {
"color" : "rgb(0,0,0)",
"source-arrow-shape" : "none",
"font-family" : "Dialog.plain",
"font-weight" : "normal",
"target-arrow-color" : "rgb(0,0,0)",
"width" : 2.0,
"source-arrow-color" : "rgb(0,0,0)",
"line-color" : "rgb(132,132,132)",
"opacity" : 1.0,
"line-style" : "solid",
"font-size" : 12,
"text-opacity" : 1.0,
"target-arrow-shape" : "triangle",
"content" : "data(pathway)"
}
}, {
"selector" : "edge[pathway = 1]",
"css" : {
"color" : "rgb(204,0,0)"
}
}, {
"selector" : "edge[pathway = 2]",
"css" : {
"color" : "rgb(51,102,0)"
}
}, {
"selector" : "edge:selected",
"css" : {
"line-color" : "rgb(255,0,0)"
}
} ]
} ]
请注意,像
elements
和style
这样的字段可以简单地被赋予承诺值,并且事情会自动工作,例如elements:fetch(url1)。然后(res=>res.json()),style:fetch(url2)。然后(res=>res.json())
看
要使
fetch()
或$.get()
工作,您必须运行http服务器。好:非常感谢@jaromanda-x和@maxkfranz,下面是解决方案
我将粘贴下面的HTML代码,其中显示了两种解决方案/方法。我上传了一个tarball,[11.141 KB],其中包含HTML文件中引用的文件,需要在下面进一步重新创建图形
cytoscape.js.demo.html
<HTML xmlns="http://www.w3.org/1999/xhtml" lang="en-us">
<HEAD>
<meta charset="utf-8" />
<style>
#cy {
width: 80%;
height: 80%;
position: absolute;
}
</style>
<script src='https://cdnjs.cloudflare.com/ajax/libs/cytoscape/3.9.0/cytoscape.min.js'></script>
<script src='https://cdnjs.cloudflare.com/ajax/libs/jquery/3.4.1/jquery.js'></script>
</HEAD>
<BODY>
<div id='cy'></div>
<script>
var json = $.getJSON("data.json")
.done(function(data){
var cy = cytoscape({
container: document.getElementById('cy'),
elements: data.elements,
style : [ {
"selector" : "node",
"css" : {
"text-valign" : "center",
"text-halign" : "center",
"font-family" : "SansSerif.plain",
"font-weight" : "normal",
"background-color" : "rgb(204,255,255)",
"border-width" : 1.5,
"height" : 35.0,
"width" : 75.0,
"border-opacity" : 1.0,
"color" : "rgb(0,0,0)",
"border-color" : "rgb(0,153,255)",
"text-opacity" : 1.0,
"background-opacity" : 1.0,
"font-size" : 12,
"shape" : "ellipse",
"content" : "data(src_node)"
}
}, {
"selector" : "node:selected",
"css" : {
"background-color" : "rgb(255,255,0)"
}
}, {
"selector" : "edge",
"css" : {
"color" : "rgb(0,0,0)",
"source-arrow-shape" : "none",
"font-family" : "Dialog.plain",
"font-weight" : "normal",
"target-arrow-color" : "rgb(0,0,0)",
"width" : 2.0,
"source-arrow-color" : "rgb(0,0,0)",
"line-color" : "rgb(132,132,132)",
'opacity': 0.5,
"line-style" : "solid",
"font-size" : 12,
"text-opacity" : 1.0,
"target-arrow-shape" : "triangle",
"content" : "data(pathway)",
'curve-style': 'bezier'
}
} ],
});
});
</script>
</BODY>
</HTML>
<!DOCTYPE html>
<HTML xmlns="http://www.w3.org/1999/xhtml" lang="en-us">
<HEAD>
<meta charset="utf-8" />
<title>[Cytoscape.js] Glycolysis + TCA Cycle</title>
<style>
#cy {
width: 100%;
height: 100%;
position: absolute;
top: 110px;
left: 0px;
bottom: 0px;
left: 0px;
}
</style>
<script src='https://cdnjs.cloudflare.com/ajax/libs/cytoscape/3.9.0/cytoscape.min.js'></script>
<script src='https://cdnjs.cloudflare.com/ajax/libs/jquery/3.4.1/jquery.js'></script>
</HEAD>
<BODY>
<div id='cy'></div>
<script>
// ==========================================================================
// APPROACH #1:
Promise.all([
fetch('relations2-glycolysis+tca.tsv.cyjs').then(res => res.json()),
fetch('styles.json').then(res => res.json())
]).then(([{elements}, [{style}]]) => {
cytoscape({
container: document.getElementById('cy'),
elements,
style,
// END, APPROACH #1-SPECIFIC CODE
// Note that we need, here, the (non-edited) Cytoscape-exported "styles.json" file.
// ==========================================================================
// ==========================================================================
// APPROACH #2: UNCOMMENT THIS (AND COMMENT APPROACH #1 LINES ABOVE):
// var json = $.getJSON('relations2-glycolysis+tca.tsv.cyjs')
// .done(function(data){
// var cy = cytoscape({
// container: document.getElementById('cy'),
// elements: data.elements,
// style: fetch('styles-edited.json').then(res => res.json()).then(json => json.style),
// END, APPROACH #2-SPECIFIC CODE
// Notes.
// 1. Here we need the (edited) Cytoscape-exported "styles.json" file: I
// needed to manually delete the leading "[ " at the top, and the lagging
// " ]" at the bottom of the Cytoscape-exported "styles.json" file:
// 2. This also works, but is not needed ("elements: data.elements" works):
// elements: fetch('relations2-glycolysis+tca.tsv.cyjs').then(res => res.json()).then(json => json.elements),
// ==========================================================================
// In either case, above, I added "curve-style" : "bezier" to the edge properties
// in the styles-edited.json file, to enable the display of the edges as arrows.
// ======================================================================
layout: {
name: 'preset',
zoom: 1.2,
pan: { x: 950, y: 2150 },
rows: 1
},
minZoom: 5e-1,
maxZoom: 0.25e1,
zoomingEnabled: true,
userZoomingEnabled: true,
panningEnabled: true,
userPanningEnabled: true,
boxSelectionEnabled: false,
selectionType: 'single',
touchTapThreshold: 8,
desktopTapThreshold: 4,
autolock: false,
autoungrabify: false,
autounselectify: false,
// Rendering options:
headless: false,
styleEnabled: true,
hideEdgesOnViewport: false,
hideLabelsOnViewport: false,
textureOnViewport: false,
motionBlur: false,
motionBlurOpacity: 0.2,
wheelSensitivity: 0.1,
pixelRatio: 'auto'
});
});
</script>
</BODY>
</HTML>
[Cytoscape.js]糖酵解+TCA循环
#赛义德{
宽度:100%;
身高:100%;
位置:绝对位置;
顶部:110px;
左:0px;
底部:0px;
左:0px;
}
// ==========================================================================
//方法1:
我保证([
fetch('relations2-glycolysis+tca.tsv.cyjs')。然后(res=>res.json()),
fetch('styles.json')。然后(res=>res.json())
])。然后(([{elements},[{style}]])=>{
细胞景观({
容器:document.getElementById('cy'),
元素,
风格
//结束,进近#1-特定代码
//注意,这里我们需要(未编辑的)Cytoscape导出的“styles.json”文件。
// ==========================================================================
// ==========================================================================
//方法#2:取消对该方法的注释(并注释上面的方法#1行):
//var json=$.getJSON('relations2-glycolysis+tca.tsv.cyjs')
//.完成(功能(数据){
//var cy=细胞景观({
//容器:document.getElementById('cy'),
//元素:数据元素,
//style:fetch('styles-edited.json')。然后(res=>res.json())。然后(json=>json.style),
//结束,进近#2-特定代码
//注释。
//1.这里我们需要(编辑)Cytoscape导出的“styles.json”文件:I
//需要手动删除顶部的前导“[”和滞后
//Cytoscape导出的“styles.json”文件底部的“]”:
//2.这也有效,但不是必需的(“元素:data.elements”有效):
//元素:fetch('relations2-glycolysis+tca.tsv.cyjs')。然后(res=>res.json())。然后(json=>json.elements),
// ==========================================================================
//在上述任何一种情况下,我都在边缘属性中添加了“曲线样式”:“bezier”
//在styles-edited.json文件中,启用将边显示为箭头。
// ======================================================================
布局:{
名称:“预设”,
缩放:1.2,
潘{x:950,y:2150},
行数:1
},
minZoom:5e-1,
最大缩放:0.25e1,
zoomingEnabled:true,
userZoomingEnabled:true,
已启用平移:true,
userPanningEnabled:true,
boxSelectionEnabled:false,
selectionType:'single',
接触阈值:8,
桌面访问阈值:4,
自动锁定:错误,
自动取消冻结:错误,
自动取消选择:false,
//渲染选项:
无头:错,
styleEnabled:true,
hideEdgesOnViewport:false,
hideLabelsOnViewport:false,
纹理视口:false,
motionBlur:错,
运动模糊不透明度:0.2,
车轮灵敏度:0.1,
像素比率:“自动”
});
});
如果您
$.getJSON(“style.json”).done(function(style){…})
style将是您想要的style:
non-jquery的数据,现代javascript将类似于我非常喜欢这个答案,但样式无法加载。这里的屏幕截图:您得到的[Object]
来自JSONoh,等等,看起来您需要。然后([{elements},[{style}]])=>{
您的styles.json文件不是有效的样式表。顶层是错误的。它应该是这样的:或者您必须执行类似style:fetch(url)。然后(res=>res.json())。然后(json=>json.style)
。另请参阅“好消息”;谢谢!Cytoscape导出的“styles”JSON文件包含需要手动删除的超前方括号和滞后方括号[
和]
。请注意,HTML文件在Web服务器中运行: