Pip PyTables似乎不承认hdf5

我有一个类似的问题，PyTables似乎不承认hdf5，尽管它显然已安装。下面是来自pip的一条略为缩写的错误消息

我要多说几句，因为我觉得这很烦人，主要是代码警告

pip install --upgrade h5py
Requirement already up-to-date: h5py in /Library/Python/2.7/site-packages
Cleaning up...
$ pip install --upgrade tables
Downloading/unpacking tables
  Downloading tables-3.1.1.tar.gz (6.7MB): 6.7MB downloaded

    ld: library not found for -lhdf5
    clang: error: linker command failed with exit code 1 (use -v to see invocation)
    * Using Python 2.7.5 (default, Mar  9 2014, 22:15:05)
    * Found numpy 1.9.0 package installed.
    * Found numexpr 2.4 package installed.
    * Found Cython 0.21 package installed.
    ld: library not found for -lhdf5
    clang: error: linker command failed with exit code 1 (use -v to see invocation)
    .. ERROR:: Could not find a local HDF5 installation.
       You may need to explicitly state where your local HDF5 headers and
       library can be found by setting the ``HDF5_DIR`` environment
       variable or by using the ``--hdf5`` command-line option.
    Complete output from command python setup.py egg_info:
    /var/folders/0w/y_9w4kq53pqfgrc72bb7cml40000gn/T/H5closekvR8zE.c:1:1: warning: type specifier missing, defaults to 'int' [-Wimplicit-int]

ld: library not found for -lhdf5

clang: error: linker command failed with exit code 1 (use -v to see invocation)

* Using Python 2.7.5 (default, Mar  9 2014, 22:15:05)

* Found numpy 1.9.0 package installed.

* Found numexpr 2.4 package installed.

* Found Cython 0.21 package installed.

ld: library not found for -lhdf5

clang: error: linker command failed with exit code 1 (use -v to see invocation)

.. ERROR:: Could not find a local HDF5 installation.

   You may need to explicitly state where your local HDF5 headers and

   library can be found by setting the ``HDF5_DIR`` environment

   variable or by using the ``--hdf5`` command-line option.

---

我认为您的问题可能是因为h5py不需要hdf5头文件，而pytables需要。要在基于debian的系统上安装它们：sudo apt get install hdf5 dev